gov.lanl.Analysis
Class PageTest

java.lang.Object
  |
  +--gov.lanl.Analysis.PageTest

Direct Known Subclasses:

GenPlot

public class PageTest

extends java.lang.Object

Field Summary

protected static gov.lanl.Analysis.SyndromicData[]	baseData
protected static double[]	basedev
protected static double[]	basemean
protected static int[]	baseSyms
protected static int[]	baseWeek
protected int[]	powersof2
protected static java.lang.String[]	symList list of symbols for the various symptoms.
protected static int[]	syms
protected static int[]	symval
protected static int[]	tempweek
protected static double[]	testdat
protected static gov.lanl.Analysis.SyndromicData[]	testData
protected static double[]	toplower
protected static gov.lanl.Analysis.TopData[]	topLower
protected static double[]	topupper
protected static gov.lanl.Analysis.TopData[]	topUpper

Constructor Summary

PageTest()

PageTest(int numWeeks, int numSyms, int numTopVals, java.lang.String outFileName)
Constructor to build the arrays.

Method Summary

void	Analyze() Compute the test results results are placed in topUpper and topLower arrays.
gov.lanl.Analysis.Range	DoPageWeek(int lasttestweek, double k)
java.lang.String[]	getData() get top values
int	getFirstSeason()
int	getLastSeason()
int	getNumBase()
int	getNumSeasons()
int	getNumSyms()
int	getNumTest()
java.lang.String	getSym(gov.lanl.Analysis.TopData topData) get the text symbol from the bit fields
gov.lanl.Analysis.TopData[]	getTopLower() get the lower values of the gov.lanl.Analysis.TopData
gov.lanl.Analysis.TopData[]	getTopUpper() get the upper values of the Top Data
void	initTopData() initialize the gov.lanl.Analysis.TopData arrays used in Analyze.
static void	main(java.lang.String[] argv)
gov.lanl.Analysis.SyndromicData[]	ReadData(java.lang.String fileName) ReadData Read in the data from a file.
void	setBaseData(gov.lanl.Analysis.SyndromicData[] data) set the base data externally
void	setBaseFile(java.lang.String basefile) set the basefile to be read in
void	setTestData(gov.lanl.Analysis.SyndromicData[] data) set the test data externally
void	setTestFile(java.lang.String testfile) set the test file to be read in
int	WeekStats(int bitmask, int bits, boolean uselogs)
void	writeResults() Output results to the OUTFILENAME

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

baseData

protected static gov.lanl.Analysis.SyndromicData[] baseData

testData

protected static gov.lanl.Analysis.SyndromicData[] testData

baseWeek

protected static int[] baseWeek

baseSyms

protected static int[] baseSyms

topUpper

protected static gov.lanl.Analysis.TopData[] topUpper

topLower

protected static gov.lanl.Analysis.TopData[] topLower

syms

protected static int[] syms

symval

protected static int[] symval

powersof2

protected int[] powersof2

topupper

protected static double[] topupper

toplower

protected static double[] toplower

basemean

protected static double[] basemean

basedev

protected static double[] basedev

testdat

protected static double[] testdat

tempweek

protected static int[] tempweek

symList

protected static java.lang.String[] symList

list of symbols for the various symptoms. This must be the same as the headings on the input data file

Constructor Detail

PageTest

public PageTest()

PageTest

public PageTest(int numWeeks,
                int numSyms,
                int numTopVals,
                java.lang.String outFileName)

Constructor to build the arrays.

Method Detail

setBaseFile

public void setBaseFile(java.lang.String basefile)

set the basefile to be read in

setTestFile

public void setTestFile(java.lang.String testfile)

set the test file to be read in

setBaseData

public void setBaseData(gov.lanl.Analysis.SyndromicData[] data)

set the base data externally

Parameters:

data -

setTestData

public void setTestData(gov.lanl.Analysis.SyndromicData[] data)

set the test data externally

Parameters:

data -

initTopData

public void initTopData()

initialize the gov.lanl.Analysis.TopData arrays used in Analyze.

main

public static void main(java.lang.String[] argv)

ReadData

public gov.lanl.Analysis.SyndromicData[] ReadData(java.lang.String fileName)

ReadData Read in the data from a file.

Parameters:

fileName - to be rad in

Returns:

SyndromicData[] array contained in file

Analyze

public void Analyze()

Compute the test results results are placed in topUpper and topLower arrays.

writeResults

public void writeResults()

Output results to the OUTFILENAME

getTopUpper

public gov.lanl.Analysis.TopData[] getTopUpper()

get the upper values of the Top Data

getTopLower

public gov.lanl.Analysis.TopData[] getTopLower()

get the lower values of the gov.lanl.Analysis.TopData

getData

public java.lang.String[] getData()

get top values

getSym

public java.lang.String getSym(gov.lanl.Analysis.TopData topData)

get the text symbol from the bit fields

Parameters:

topData -

WeekStats

public int WeekStats(int bitmask,
                     int bits,
                     boolean uselogs)

DoPageWeek

public gov.lanl.Analysis.Range DoPageWeek(int lasttestweek,
                                          double k)

getNumTest

public int getNumTest()

getNumBase

public int getNumBase()

getNumSeasons

public int getNumSeasons()

getFirstSeason

public int getFirstSeason()

getLastSeason

public int getLastSeason()

getNumSyms

public int getNumSyms()